The rail industry appears to have no such safeguards in place; this is just the latest issue out of many that have been brought to light on this forum.So, leaving aside the separate issue that (some?) journey planners have been bungling the application of thiseasementembuggerment, no forum members can yet elucidate what (in Chiltern's view) misuse of what ticket(s) Chiltern were seeking to prevent. And, if the railway has procedures to restrain train companies from raising unnecessary embuggerments, and implementing them in daft ways, these procedures did not work in this instance.
I do not think there are any plans to bring in such safeguards and it's not the sort of thing the Rail Ombudsman or Transport Focus are interested in, sadly.